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Showing all 50 items for (author: sousa & dr)

EMDB-43658:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43659:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43660:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vye:
SARS-CoV-2 S (C.37 Lambda variant) plus S309, S2L20, and S2X303 Fabs
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vyf:
SARS-CoV-2 S NTD (C.37 Lambda variant) plus S2L20 and S2X303 Fabs, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vyg:
SARS-CoV-2 S RBD (C.37 Lambda variant) plus S309 Fab, local refinement
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-13978:
S. cerevisiae CMGE nucleating origin DNA melting
Method: single particle / : Lewis JS, Sousa JS, Costa A

EMDB-13988:
S. cerevisiae CMGE dimer nucleating origin DNA melting
Method: single particle / : Lewis JS, Sousa JS, Costa A

EMDB-14439:
S. cerevisiae CMGE dimer nucleating origin DNA melting
Method: single particle / : Lewis JS, Sousa JS, Costa A

PDB-7qhs:
S. cerevisiae CMGE nucleating origin DNA melting
Method: single particle / : Lewis JS, Sousa JS, Costa A

PDB-7z13:
S. cerevisiae CMGE dimer nucleating origin DNA melting
Method: single particle / : Lewis JS, Sousa JS, Costa A

EMDB-24109:
Inactivated state of 2-APB-bound wildtype rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RA, Protopopova AD, Gallo PN, Moiseenkova-Bell VY

EMDB-24110:
Activated state of 2-APB-bound wildtype rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RA, Protopopova AD, Gallo PN, Moiseenkova-Bell VY

EMDB-25650:
Activated state of 2-APB and CBD-bound wildtype rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RA, Protopopova AD

EMDB-25651:
Inactivated state of 2-APB and CBD-bound wildtype rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RA, Protopopova AD

PDB-7n0m:
Inactivated state of 2-APB-bound wildtype rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RA, Protopopova AD, Gallo PN, Moiseenkova-Bell VY

PDB-7n0n:
Activated state of 2-APB-bound wildtype rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RA, Protopopova AD, Gallo PN, Moiseenkova-Bell VY

PDB-7t37:
Activated state of 2-APB and CBD-bound wildtype rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RA, Protopopova AD, Gallo PN, Moiseenkova-Bell VY

PDB-7t38:
Inactivated state of 2-APB and CBD-bound wildtype rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RA, Protopopova AD, Gallo PN, Moiseenkova-Bell VY

EMDB-26390:
SAAV pH 7.4 capsid structure
Method: single particle / : Mietzsch M, McKenna R

EMDB-26391:
SAAV pH 6.0 capsid structure
Method: single particle / : Mietzsch M, McKenna R

EMDB-26392:
SAAV pH 5.5 capsid structure
Method: single particle / : Mietzsch M, McKenna R

EMDB-26393:
SAAV pH 4.0 capsid structure
Method: single particle / : Mietzsch M, McKenna R

EMDB-26394:
The SAAV capsid in complex with 3'SLN
Method: single particle / : Mietzsch M, McKenna R

EMDB-26395:
The SAAV capsid in complex with 6'SLN
Method: single particle / : Mietzsch M, McKenna R

PDB-7u94:
SAAV pH 7.4 capsid structure
Method: single particle / : Mietzsch M, McKenna R

PDB-7u95:
SAAV pH 6.0 capsid structure
Method: single particle / : Mietzsch M, McKenna R

PDB-7u96:
SAAV pH 5.5 capsid structure
Method: single particle / : Mietzsch M, McKenna R

PDB-7u97:
SAAV pH 4.0 capsid structure
Method: single particle / : Mietzsch M, McKenna R

EMDB-24266:
Cryo-EM structure of AAV True Type
Method: single particle / : Bennett AD, McKenna R

PDB-7na6:
Cryo-EM structure of AAV True Type
Method: single particle / : Bennett AD, McKenna R

EMDB-21705:
PL-bound rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RP, Moiseenkova-Bell VY

PDB-6wkn:
PL-bound rat TRPV2 in nanodiscs
Method: single particle / : Pumroy RP, Moiseenkova-Bell VY

EMDB-10870:
Cohesin complex with loader gripping DNA
Method: single particle / : Higashi TL, Eickhoff P, Sousa JS, Costa A, Uhlmann F

EMDB-10930:
Cohesin complex with loader gripping DNA
Method: single particle / : Higashi TL, Eickhoff P, Sousa JS, Costa A, Uhlmann F

PDB-6yuf:
Cohesin complex with loader gripping DNA
Method: single particle / : Higashi TL, Eickhoff P, Sousa JS, Costa A, Uhlmann F

EMDB-10092:
KimA from Bacillus subtilis in inward-facing, occluded state
Method: single particle / : Tascon I, Sousa JS, Vonck J, Haenelt I

PDB-6s3k:
KimA from Bacillus subtilis in inward-facing, occluded state
Method: single particle / : Tascon I, Sousa JS, Vonck J, Haenelt I

EMDB-7452:
Atomic structure of a rationally engineered gene delivery vector, AAV2.5
Method: single particle / : Burg M, Rosebrough C

PDB-6cbe:
Atomic structure of a rationally engineered gene delivery vector, AAV2.5
Method: single particle / : Burg M, Rosebrough C, Drouin L, Bennett A, Mietzsch M, Chipman P, McKenna R, Sousa D, Potter M, Byrne B, Kozyreva OG, Samulski RJ, Agbandje-McKenna M

EMDB-8574:
Single particle reconstruction of chimeric adeno-associated virus-DJ with a Heparanoid Pentasaccharide
Method: single particle / : Xie Q, Noble AJ, Sousa DR, Meyer NL, Davulcu O, Zhang FM, Linhardt RJ, Stagg SM, Chapman MS

EMDB-8521:
3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
Method: single particle / : Demo G, Svidritskiy E

EMDB-8522:
3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)
Method: single particle / : Demo G, Svidritskiy E

PDB-5u9f:
3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
Method: single particle / : Demo G, Svidritskiy E, Madireddy R, Diaz-Avalos R, Grant T, Grigorieff N, Sousa D, Korostelev AA

PDB-5u9g:
3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)
Method: single particle / : Demo G, Svidritskiy E, Madireddy R, Diaz-Avalos R, Grant T, Grigorieff N, Sousa D, Korostelev AA

EMDB-6470:
Single particle reconstruction of AAV-DJ in complex with ARIXTRA
Method: single particle / : Spear JM, Noble AJ, Xie Q, Sousa DR, Chapman MS, Stagg SM

EMDB-5717:
The structure of Sinorhizobium meliloti phage phiM12, a novel T=19 icosahedral phage that is the founder of a new group of T4-like phages
Method: single particle / : Stroupe ME, Brewer TE, Sousa DR, Jones KM

EMDB-5718:
The structure of Sinorhizobium meliloti phage phiM12, a novel T=19 icosahedral phage that is the founder of a new group of T4-like phages
Method: single particle / : Stroupe ME, Brewer TE, Sousa DR, Jones KM

EMDB-5751:
Cryogenic electron microscopy of cardiac actin:tropomyosin
Method: single particle / : Sousa DR, Stagg SM, Stroupe ME

EMDB-5752:
Cryogenic electron microscopy of cardiac actin:tropomyosin
Method: single particle / : Sousa DR, Stagg SM, Stroupe ME

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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